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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015861672.1_cds_XP_016515027.1_27412
CDS Infomation

[gene=LOC107831744] [db_xref=GeneID:107831744] [protein=nucleotide pyrophosphatase/phosphodiesterase-like isoform X2] [protein_id=XP_016515027.1] [location=join(135055..135176,141755..141830,142245..142367,143088..143180,143422..143551,144234..144315,144408..144540,147430..147635,147772..147897,149417..149726,150638..150943)] [gbkey=CDS]
Sequence

ATGAACATAATCACATCCAAGGGGAACAGCCATTATCAAGAATTCAAATCCACAAAACTG
TTGTTGCTCTTCGTCAATCTGCCTCCATTAGAGTTGATGGACCTACTCTTCTTGGCTCTA
AGTGAATCCATTTGTCCCCCACAAACCATCAAAGAACAACAATCTGGAGCTCCATTTATC
TGTACTGCCCCCTTAAAGTTCAAATTTGCAAATTACAGCAATGACAAGTACACAAAGACA
GGGAAAACTTCACTGAATTTCCGGATAATTAACCAGCGTGGGGATTTCTCATTTGCCTTA
TTCTCTGGGGGTTTGTCAAATCCCAAGTTGATAGCCATCTCAAATTACATTGCATTTGCC
AATCCGAAAGCACCCCTTTATCCGCGTCTTGCTCTTGGGAAATCATGGGATATAATGACT
GTTACTTGGACAAGTGGTTACAATATAGATGAGGCTGTTCCATTCGTCGAATGGGGTTGG
AAGGGCCAAGCTCAACAACGCTCCCCAGCAGGGACACTGACATTTCATCGGAACAGCATG
TGTGGACCACCTGCTAGAACTGTGGGATGGCGTGATCCTGGATTCATACATACTAGTTTC
CTGAAGGATTTGTGGCCAAATGTGGTGTACACATACAAGTTGGGTCACTTGTTAACCGAT
GGTTCAATTGTTTGGAGCAAGAAATATTCATTTAAATCTCCTCCATTTCCAGGACAAGAG
TCACTGCAACGCGTTGTGATATTTGGAGACATGGGCAAGCAAGAGTGCGATGGTTCAAAC
GAATATGCTAATTATCAGCCTGGCTCACTTATGACAACTGACACCCTTATTAATGACCTT
GATAACATTGACATAGTTTTCCTTATTGGAGATCTCCCCTATGCGAATGGCTATCTTTCA
CAGTGGGACCAATTTACAGCTCAGGTGGAACCAATAACATCGAAAGTGCCCTTCATGATT
GCCAGTGGTAATCATGAAAGAACTTGGGAGAACAGTGGATCAATATACAATGGTCGTGAC
TCAGGTGGAGAATGTGGTGTACCAGCTGAAACATTATACTATGTTCCAGCAGAAAATAGA
GCTAAGTTCTGGTATGCAGCAGATTATGGCATGTTTCACTTCTGTGTAGCAGACACTGAG
CATGACTGGAGAGAGGGATCTGAACAATATAAGTTCATTGAGAAATGCTTTGCATCAGCC
AATAGACATAAACAGCCTTGGTTGATTTTTGCTGCTCATCGTGTTCTTGGTTACTCTTCT
AATGATTGGTATGCTAAGGAAGGCTCATTTGAAGAGCCCATGGGAAGGGAGCACTTGCAG
AAACTCTGGCAAAAATATAAGGTTGATATGGCATTTTATGGGCACGTCCATAACTATGAA
AGAGTTTGCCAAATTTACCAGAATCAATGTGTGAACAAGGAGACATCACACTACTCGGGC
GTAGTGAAAGGAACAATTCATGTTGTTGTTGGGGGAGGAGGAAGCCATTTGAATAAATTT
ACCGCCATTAACACTACATGGAGCGTGTTCAAAGATTATGATTGGGGGTTTGTCAAACTT
ACAGCATTTAACCAATCTTCCCTTCTCTTTGAGTACAAGAAGAGCAGAGATGGTAAGGTG
TATGATTCTTTTACAATCTCAAGAGACTATAAGGATGTCTTAGCTTGTGTCCATGATGGC
TGTGAACCAACTACTTTGGCTAATTAA

Peptide Sequence

PEP ID

XP_016515027.1
PEP Infomation

PREDICTED: nucleotide pyrophosphatase/phosphodiesterase-like isoform X2 [Nicotiana tabacum]
Sequence

MNIITSKGNSHYQEFKSTKLLLLFVNLPPLELMDLLFLALSESICPPQTIKEQQSGAPFI
CTAPLKFKFANYSNDKYTKTGKTSLNFRIINQRGDFSFALFSGGLSNPKLIAISNYIAFA
NPKAPLYPRLALGKSWDIMTVTWTSGYNIDEAVPFVEWGWKGQAQQRSPAGTLTFHRNSM
CGPPARTVGWRDPGFIHTSFLKDLWPNVVYTYKLGHLLTDGSIVWSKKYSFKSPPFPGQE
SLQRVVIFGDMGKQECDGSNEYANYQPGSLMTTDTLINDLDNIDIVFLIGDLPYANGYLS
QWDQFTAQVEPITSKVPFMIASGNHERTWENSGSIYNGRDSGGECGVPAETLYYVPAENR
AKFWYAADYGMFHFCVADTEHDWREGSEQYKFIEKCFASANRHKQPWLIFAAHRVLGYSS
NDWYAKEGSFEEPMGREHLQKLWQKYKVDMAFYGHVHNYERVCQIYQNQCVNKETSHYSG
VVKGTIHVVVGGGGSHLNKFTAINTTWSVFKDYDWGFVKLTAFNQSSLLFEYKKSRDGKV
YDSFTISRDYKDVLACVHDGCEPTTLAN

Transcript Sequence

Gene sequence data has not been registered.